You may want to check with Rebel on this. I believe that the iron for the Mississippi was actually pre-cut to specs at Atlanta. I don't know if it was drilled there. There were a pair of drilling machines on site at Ft. Pickens (Arkansas building yard). They were packed up and shipped elsewhere to prevent capture at Memphis in early June, 1862. I don't know what they used for cutting off the rails, but there were a number of machine shops available including the hub shop of one of the railroads at Memphis. The Naval Station at Shreveport must have operated with much more primitive equipment, they ran most of the broadside rails diagonally to minimize cutting. Most connectors or fittings were done at local foundries or by blacksmith shops. Lt. Brown was notorious at Yazoo City for mobilizing all of the local blacksmithing tools and smiths. The Tredegar was pretty much equipped to form anything, but had a huge backlog of orders. The Station at Selma built up a very impressive industrial base to support the Naval Gun Factory. Another impressive achievement was Warner's yard at Columbus, Ga., an excellent book called "Naval Gray" is available about Columbus.